Blog
About

Category: Announcements

A place to group posts

New partnership with Cold Spring Harbor

 

At ScienceOpen we’re pleased to announce yet another new publishing partnership with Cold Spring Harbor. Cold Spring Harbor Laboratory Press is an internationally renowned publisher of books, journals, and electronic media, located on Long Island, New York, USA. Since 1933, it has helped to advance scientific knowledge in all areas of genetics and molecular biology, including cancer biology, plant science, bioinformatics, and neurobiology.

Cold Spring Harbor Molecular Case Studies is an open access, peer reviewed, international journal in the field of precision medicine. Anyone can now freely browse, sort, and peer review any content from the journal using our advanced discovery engine.

untitled

Articles display scores from Altmetric, and like all other open access content on our platform display the little OA logo. Integrated into our existing corpus of 26 million articles and article records, Cold Spring Harbor content will be put into context through our citation and recommendation network.

For more information about our indexing services, please contact our Marketing Manager Agata Morka (agata.morka@scienceopen.com). We are still running our free indexing competition for APC-free open access journals, so get in touch if you qualify!

Brill content now live at ScienceOpen

Recently we made the announcement that we were partnering with Brill, a major publisher in the Humanities and Social Sciences for more than 300 years, and who publishes more than 250 journals and 1000 books and reference works each year.

The journals now indexed on our site, and some of the selected articles are:

  1. Indo-European Linguistics, a fully open access journal devoted to the study of the ancient and medieval Indo-European languages:
    1. Dark matter (link)
    2. Using stem suppletion for semantic reconstruction: The case of Indo-European modals and East Baltic future tense formations (link)
    3. Borrowing, Character Weighting, and Preliminary Cluster Analysis in a Phylogenetic Analysis of the Ancient Greek Dialects (link)
    4. Sonority Sequencing Violations and Prosodic Structure in Latin and Other Indo-European Languages (link)
    5. Accent in Thematic Nouns (link)
    6. Reconstruction Syntactic Variation in Proto-Indo-European (link)

  2. Journal of Greek Linguistics, a fully open access journal dedicated to the descriptive and theoretical study of the Greek language:
    1. On the theoretical implications of Cypriot Greek initial geminates (link)
    2. Subject-verb agreement with coordinated subjects in Ancient Greek (link)
    3. Greek phonetics: The state of the art (link)
    4. Perceptions of difference in the Greek sphere: The case of Cyprus (link)
    5. Morphology in Greek linguistics: The state of the art (link)
  3. Language Dynamics and Change, an international peer-reviewed journal that covers both new and traditional aspects of the study of language change:
    1. On some problematic aspects of subjectification (link)
    2. Correlates of reticulation in linguistic phylogenies (link)
    3. Some principles on the use of macro-areas in typological comparison (link)
    4. A pipeline for computational historic linguistics (link)
    5. Using phylogenetic networks to model Chinese dialect history (link)
    6. Molecular perspectives on the Bantu expansion: A synthesis (link)

Continue reading “Brill content now live at ScienceOpen”  

In:  Announcements  

ScienceOpen helps to put scientific research in a global context with more than 15 million article records

In a fairly big release today, we are pleased to announce a big new partnership with SciELO, the Scientific Electronic Library Online. Many of you might know SciELO as the leading Open Access publisher in Latin America and what we might consider to be developing or emerging countries. At last count, they had published almost 600,000 peer reviewed research articles in more than 1200 journals, so constitute an enormous contribution to our global research knowledge!

Typically, SciELO content is still largely excluded from what we might consider the ‘research powerhouses’ and “global” indexing platforms of the western world. In 2013, SciELO was integrated into the Web of Science, but only covered around half of their journals. Some SciELO Brazil content is also indexed in Scopus, but this is a pay-to-access service.

As such, simply being Open Access is not sufficient in the current scholarly publishing climate – you have to be promoted, shared, and recognised too! This is crucial for publishers in terms of generating increased visibility, transparency, and credibility for research, all principles embodied by Open Access. So ScienceOpen is partnering with SciELO to generate increased visibility for its content, and to provide an enhanced global perspective on research.

Some might be wondering where you’ve heard of SciELO before. Well, Open Access advocate and keeper of predatory publishing lists Jeffrey Beall publicly commented last year that SciELO was akin to the ‘favelas’ of the scholarly publishing world, and created a bit of a stir. Thankfully, this derogatory and unnecessary characterisation was met with appropriate responses, but revealed a somewhat ingrained cultural perspective that some ‘western’ academics, and those involved in scholarly publishing, might still have: research and publishing from Latin America and peripheral countries is of lower quality than the north, for no apparent reason than geography; a factor which is often referred to as ‘ethnocentric prejudice’.

Untitled

Well, at ScienceOpen we think such views are not helpful in creating a more global, collaborative and open research foundation. We believe that through integration we are stronger, and that we gain more by transcending barriers than creating them. The future of research is through global collaboration, sharing, and enabling open practices, and this is what we’re doing with SciELO. Indeed, SciELO are arguably doing more to advance Open Access publishing and global knowledge than many well-established publishers in Europe and North America!

Which is why partnering with SciELO is exciting for us for many reasons!

Continue reading “ScienceOpen helps to put scientific research in a global context with more than 15 million article records”  

In:  Announcements  

ScienceOpen joins ORCID initiative

ORCID (Open Researcher and Contributor ID) is a community-based effort to provide a registry of unique and persistent researcher identifiers, and through this links to research activities and outputs. It is a powerful tool for both researchers and institutions, and can be easily integrated with CrossRef, PubMed Central, Scopus, and other data archives to populate researcher records.

At ScienceOpen, we have always supported the use of ORCID within our services. Membership at ScienceOpen can be updated directly using your ORCID profile, providing seamless integration of the two. To comment, review and rate articles, we require an ORCID along with membership at ScienceOpen. If you have more than 5 articles within your ORCID profile, you’ll gain Expert member status with us, and free reign of services!

Continue reading “ScienceOpen joins ORCID initiative”  

In:  Announcements  
My new role at ScienceOpen – Jon Tennant (@protohedgehog)

My new role at ScienceOpen – Jon Tennant (@protohedgehog)

Hello there, and Happy New Year from the new Communications Director of ScienceOpen!

My name’s Jon, and I’m currently finishing up my PhD at Imperial College London, where I’m a palaeontologist! (think Ross from Friends..) This year, I’ve been fortunate enough to join the ScienceOpen team to help grow their communications and networking abilities, and continue to realise the benefits of their pretty cool open research networking platform.

Profile pic thing

Those of you who know me will be aware that open access and more broadly, open science and communications, is something that I’ve been quite active in over my short career as a researcher. Some of the more ‘open-related’ projects I’ve been involved with include the writing of the Open Research Glossary, as well as challenging the AAAS on non-optimal publishing practices. For those of you lucky enough not to have met me yet, I’m highly interested in a whole array of factors that influence scholarly communication, including:

  • Publishing and disruptive technologies and innovation
  • Access to raw data and reproducibility
  • Community building and the power of social networks
  • Social media for researchers
  • Science communication, public engagement and outreach
  • Academic assessment and altmetrics

I’ll be taking over the reins from Liz Allen, who will shortly announce her new non-profit role. Rest assured that she will continue to spread the word about the importance of open. On behalf of the ScienceOpen team, I’d like to take this opportunity to thank Liz for helping to establish our brand and offering her personal support as I get up to speed with the nuances of the job. Over the next few months (and onwards), I hope to help to raise awareness of what ScienceOpen does, and why it should be part of the essential toolkit for researchers, along with a host of other innovative applications that are bringing research into the digital age.

Why ScienceOpen? Well, apart from the obvious name, I support their ideals that science deserves to be open, transparent, and equal in every way. This essentially is the inverse of the traditional method of scholarly communication of publishing via journals, which are closed, opaque, and beset by inequalities on all fronts, the foremost being financial. ScienceOpen offers a valuable service that doesn’t replace traditional publishing, but compliments it through having a community aspect of driving open peer review, which is still the golden standard of acceptability for published research. Combine this with a hefty archive of both open and non-open research articles, and you have a valuable platform for developing research networks and building upon the published literature in an open, transparent, and community-driven way. For me, this is just one of the many ways in which the way we conduct research and disseminate those results is changing for the better, by harnessing the power of the Web and the opportunities it gives us for greater inter-operability throughout academia.

Alongside my activities here, I’ll be continuing my research and finishing the dreaded thesis, as well my science communication activities, in particular for the PLOS Paleo network which is great fun! So essentially combining my three favourite things: research, science communication, and open science policy and communications. Yay!

You can contact me on Twitter, or drop me an email if you wish. I look forward to working with ScienceOpen, and with them the global research community!

In:  Announcements  

A dialogue between ScienceOpen & Altmetric – discussing our new partnership

Following well received news earlier this week that we have enabled content filtering (over 10 million articles and records) on ScienceOpen by Altmetric scores (which measure social and mainstream media attention) and Citations, we’re delighted to share this convo between Euan (Altmetric) and Stephanie (ScienceOpen).

Euan: ScienceOpen is beginning to show up on our radar as a content aggregator. What is your goal with ScienceOpen and where are you heading?

Stephanie: Our goal has always been more open scholarly communication.

AMlogowbox
Altmetric Badge aka the Rainbow Donut!

ScienceOpen is a freely accessible network for aggregating, sharing, and evaluating research information with over 10 million Open Access articles and bibliographic records. Moving forward our focus is on exposing the context of scholarly content. Powerful search and filtering tools, including the first publically available citation index and now the article Altmetric score, will help researchers rapidly find the literature they need.

Altmetric is also an information aggregator and has strongly influenced the debate on how to measure research impact. Altmetric is highlighting the benefits of Open Access in terms of increased attention by the scholarly community. I think it was at a conference coffee break when we talked about how it would be great to be able to search and filter by Altmetric score and now here we are – natural partners!

Euan: What first got you interested in altmetrics and why were you keen to add the Altmetric badges to the site?

At ScienceOpen, the individual research article is always at the center of what we develop. The Altmetric score provides unique insight into the quality and quantity of attention that a scholarly article has received. If citations represent the geneology of an idea, altmetrics tracks its dissemination. Together they give a fuller picture of the “impact” of an article – a tricky category but a worthwhile goal.

By making search results filterable by both citation numbers and Altmetric score, we can provide researchers with different entryways into the data – and that in and of itself may generate new ideas. That is why we were so interested in including the Altmetric badges on the site.

And of course we love the rainbow donuts!

SOlogowbox
Our logo

Euan: How do you think that authors or researchers can make best use of your platform? 

In three main ways.

It’s a great discovery resource. A search on ScienceOpen does not just pull up a list of article records, but rather a network of information. Topics and articles can be explored via authors, references, keywords, altmetrics, comments and more. Results can be narrowed and sorted and the search parameters saved. Most importantly, the research itself is center stage independent of publisher and journal. We strive to expose as much context for the research on our site as possible.

All content on the platform is available for Post-Publication Peer Review by scientific members with five or more peer-reviewed publications on their ORCID which helps maintain a high standard of discourse. Our larger goals here are to speed up the communication of science by moving its evaluation to after publication, to eliminate anonymity in the interests of transparency and to ensure that the conversation around science never ends. From our perspective, quality assurance does not end at the moment of publication.

ScienceOpen also appoints members of the research community to the role of Collection Editor and they curate articles from multiple publishers in any topic using a Collection tool. The big picture here is to complement the topical bundling done by individual journals and publishers with flexible post-publication collections across all scientific knowledge.  The best papers can be included, regardless of whether published on a pre-print server or top journal. In this way we can support of the values espoused by DORA by developing alternatives to the Impact Factor.

Euan: On the technical side, the content you host – could you tell us where it comes from, and how much we’re talking about in terms of volume?

Our platform currently consists of over 10 million articles and records. We have imported to-date 950K full text Open Access articles from PubMed Central and roughly 830K records from arXiv. The additional roughly 8 million bibliographic records are extracted from the references within the full text content.  We have started updating the records with the full metadata from external sources (currently PubMed ORCID) for better usability of the content. We also compare the references to ensure that we have good matching so we can merge reference data to create our citation index.

Euan: Where will site visitors be able to find the badges/what can they expect to see? 

Researchers will find the Altmetric badge both on the search results page, where they can filter their search by Altmetric score to find the most talked-about paper in their field, as well as on each individual article page as part of the article metrics. When researchers have landed on a paper of interest, they can drill down to find out exactly what aspect of the research people are talking about. The score itself is just a starting point to discover more and we would hope that researchers would treat it critically as with any metric.

As we continue to develop the site we may find unique ways to present the Altmetric score such as an aggregated Altmetric score for collections.

Euan: Do you offer any other article level metrics?

We are committed to providing as much context to an article as possible and article level metrics are central to this mission. On each article page we have a summary box that displays reader numbers on ScienceOpen, citations, post-publication reviews, comments, recommendations and shares.

Search results from within the 10 million articles and records on the site can be filtered by reader count, review rating and, most recently, number of citations.

We have taken the first steps towards a publically available citation index, something that the scientific community truly needs. Researchers can sort their search results by citation number, view the reference list sorted by citation and see other articles by same author, with more contextual information to come. These citation numbers are correct (in a relative not an absolute sense) and can be very useful together with the Altmetric badge to quickly sort articles based on attention by the scientific community.

donutboxwborder
Delicious. Image credit: Jean Liu, Altmetric

Euan: Would you like a Donut? 

I don’t mind if I do. By return, here’s a 41 second video “How to filter your search by Altmetric” complete with groovy Berlin Techno soundtrack (nice going Dan Cook!).

In:  Announcements  

There’s more to Open Access than APCs, right?

I am the Co-founder and Chief Strategy Officer, ScienceOpen (@tigracc). This OA Week, it gives me great pleasure to publish the first in a series of posts about the strategy behind the evolution of the platform and our drive to reveal the context of OA articles which we believe is a powerful and disruptive mechanism in the next wave of the OA movement.

Content > context by Ryan Van Etten, Flickr, CC BY

Our start

When ScienceOpen started our Open Access initiative in 2013, we focused on publishing and networking. We understood that research communication is all about Open Access content and networking was the mechanism that supported authors in preparing their article and helping the publication of their research. And such articles had to be openly available, so they could be discovered and serve as proof of their engagement.

We of course also knew that other organizations offered a great deal but all these features were available as bits and pieces on other publisher’s sites (Post-Publication-peer-review, “speedy publication after a thorough but fast editorial acceptance, among others), but not in one place and not combined. We felt there was far too much focus on vanity and luxury at the core of the publishing process, instead of support for researchers who need to understand what others before them have done and deliver their contribution, that could and would be incorporated into the ever growing corpus of knowledge. Researchers are builders and breakthroughs are the result of collaboration over time. Ingenious ideas need a base to evolve from and – less eloquently said then Newton and some others before – there’s no genius who doesn’t stand on the shoulders of others before them.

Along the way, we recognized some thresholds and obstacles slowing down the migration to Open Access and they were greater then we initially anticipated. We were always aware of the Impact Factor trap, fostering the illusion that it provides a glorious, if sometimes miraculous, entry into the higher echelons of science, but we also knew that it was based on a hollow foundation.

Over time, we learned to see this entire conundrum from the viewpoint of the individual researcher. She does not have the luxury of statistics, it’s all about her research, her fight for her career and as long as institutions use these as a major tool for gratification, it is the researchers de facto trap of our time. There’s not much difficulty asking established scientists to publish Open Access and similarly offering services to young scientists, especially by providing a home for posters and the like, is easy. But the mass of scientists, too young to be settled and too old to take a risk, is a different animal.

We do see them (slowly) turning to Open Access but, somewhat alarmingly, we see them doing that with traditional publishers like Springer Nature, PLOS, Wiley and others, than with new and “revolutionary” ones [1]. Why? Because those settled publishers provide Brands and for the time being IFs, that the researchers can present. They are taking a step in the right direction, just a more expensive and challenging one than it needs to be. There’s no blame here and there are a few ways we can press forward:  we can ask tenure commissions, research funders and institutions to stop considering brand-related impact factors and start seriously focusing on the articles themselves, and we will continue to do so together with the core of the Open Access movement. While this trend is further eroding the base of the Impact Factor illusion it’s not really razing it to the ground.

So, is that it? We just wait another 10 to 15 years till the Impact Factor starts to wither and hope that we win out on the long run?

Instead of doing just that, we need to go forward by continuous development of (a) new publishing paradigm(s) and we need to start to show the (currently hidden) additional benefits of Open Access. Benefits which are transcending the “article” and start to expose a glimpse of the new eco-system, which can flourish with this opening.

Next Phase

We see three pillars for ScienceOpen to focus on, all of them geared to help create an eco-system,which inherently weakens the Impact Factor and therefore helps to direct energy and momentum to Open Access:

  1. Context
  2. Curation
  3. Quality

 Context:

Here’s what we set out to acheive:

  • Put the article at the center (independent of publisher, journal and other silos)
  • Expose all available article based information (activities, reviews, comments, …)
  • Provide as much context as we can (references and citations)
  • Reveal key relationships (Authors, Affiliations, …)

This strand is the newest addition to the ScienceOpen platform. Just recently we started to expose contextual information on the more than 10 million articles and records aggregated on ScienceOpen. We did this by consecutively creating stubs for all referenced articles from the base Open Access corpus. Adding more and more publicly available but distributed information about these articles and extracting additional facts, we can already expose the connections of almost 6 million authors mainly in Life Sciences. We do provide information about similar articles, most cited references, most referenced authors and all detected citations. This, like other available metadata, can be used to navigate, research and learn about the context of a given article. Given that our article base is publisher and journal independent, all this context becomes meaningful and turns the whole article base itself into a research object, at the fingertips of the researcher. All this information is revolving around the core content instead of arbitrary segments like the publisher. We allow you to focus on the research itself, to explore related information, people and institutions. Go on and find out who else is researching about the field in question, which connections are more meaningful than others, what collaborations exist etc.

Curation:

Months ago we started to support and propagate the usage of Collections. We see Collections as a way to create theme-based and up to date clusters of information that matter most for any specific field of research. These being journal and publisher independent and as such another nail in the coffin for the Impact Factor. I don’t believe that any Journal can be a better collection on any theme, than one that is based from a researchers selection from the universe of content. Our Collections can and will expose different aspects of a topic– foundation articles, most discussed ones, etc. – and can therefore become a natural magnet for publishing negative results where they make most sense.

Quality:

Since the launch of ScienceOpen, we have worked on providing a platform that lends itself to the concept of Public Post Publication Peer Review (P4R), an approach that helps to attack one of THE corner stones of the Closed Access Publishing Paradigm: the use of enormous energy from the research community for an almost always secretive peer review process with the main purpose of utilizing selection to improve the Impact Factor of a journal. Besides the price of suppression of less glamorous results (including negative results) and/or slowing down the publishing process to an unacceptable degree and all the costs for society this generates, traditional peer review hampers public discourse and is bad for science. Instead P4R speeds up publication, fosters public discourse and allows the reviewer to benefit from their (now public) work.

We strongly believe, that the set of these activities is invigorating the the strength of the Open Access paradigm. ScienceOpen is committed to work on all three of these strands to expose more of the inherent strength of Open Access. Over the course of the next weeks and months we will discuss these activities in more detail and add more functionality along these lines.

[1] See also “Return of the Big Brands: How Legacy Publishers Will Coopt Open Access”, a Post by Joseph Esposito on The Scholarly Kitchen, Oct 14, 2015 – http://scholarlykitchen.sspnet.org/2015/10/14/return-of-the-big-brands/

 

In:  Announcements  

New Indexing Service for Academic Publishers Launching at Frankfurt Book Fair

Image credit: Frankfurter Spargel by Martin Fisch, CC BY
Image credit: Frankfurter Spargel by Martin Fisch, CC BY

Today and tomorrow, all eyes are on Frankfurt for the STM pre-meeting and the Frankfurt Book Fair. In this Press Release, we announce our publicly available citation index with more than 10 million scientific articles and records.

Publishers can join in by indexing their journal content across all research disciplines (now including the humanities and social sciences) and license types on ScienceOpen for enhanced visibility within a wider academic context. This unique service is open for all researchers worldwide and will be launched at the Frankfurt Book Fair this week.

Since its launch in 2014, ScienceOpen has exponentially grown its database to allow researchers to more easily navigate, search and comment on scientific articles. A search on ScienceOpen does not just pull up a list of article records, but rather a network of information.

Topics and articles can be explored via authors, references, keywords, altmetrics, comments and more. Results can be narrowed and sorted and the search parameters saved. Content – popping up in the context of such search & navigation – is pulled center stage independent of publisher and journal.

Stephanie Dawson, CEO of ScienceOpen says:

All these features provide a superior search experience for researchers and advantages for publishers in having their content and brand promoted. With this new offering, we are expanding Open Access to indexing information at the point of (re)search.

The ScienceOpen network is freely accessible for researchers to join, search, discover and share. This new feature will be introduced at the Frankfurt Book Fair (FFBF) this week, the world largest event for academic publishers worldwide. Talk to our team in and around Hall 4 at the FFBF to learn how to include your concent and benefit from this fast growing index.

Game on! Peer Review Week 2015

Image credit: Life is good by John Hain, Flickr, CC BY
Image credit: Life is good by John Hain, Flickr, CC BY

Life in California is good. Truthfully, that’s an understatement. As an ex-pat Brit, it’s great. Public holidays are rarely marred by rain; tomatoes grow outdoors (as do Oranges and Avocados); every work day is “casual Friday”.

There’s really only one downside, and that’s our time zone which means that in terms of the global conversation, we are constantly last to the party!

And so it goes with the first ever Peer Review Week. As the “lady at the helm” for social media, it’s lunchtime here in San Francisco and I am frantically trying to catch up with all the stories that everyone else has already posted.

PRW
Logo: download wiley.com/peerreviewweeklogos

Rather than give you an exhaustive list of the conversations and coverage, which you can see for yourself from #peerrevwk15, I am going to highlight a few that particularly stood out from me.

  1. Posts from our fellow Peer Review Week founding partners – Wiley, ORCID (Alice Meadows of ORCID on Scholarly Kitchen) and Sense About Science.
  2. Author instructions for an additional peer review process here at ScienceOpen, called Peer-Review by Endorsement or PRE with a reduced publication fee of 50% off. More on this from Board Member Jan Valterop this week, in the meantime here’s a previous post.
  3. A Webinar on October 1st, which includes among its speakers our co-founder Alexander Grossmann. Sign up here.
  4. An opportunity to sign the Peer Review Manifesto from Open Scholar.
  5. Test your ability to navigate tricky Peer Review scenarios by taking this quiz from BioMed Central.
  6. Listen to this podcast by Chris O’Neil from Bioscientifica which begins with a truism “none of us like the peer review process”! He goes onto explain that despite this visceral reaction, that most researchers accept that their article is improved by it.
Image credit: Thank you by NoirKitsuné, Flickr, CC BY
Image credit: Thank you by NoirKitsuné, Flickr, CC BY

If you are new to the concept of Post-Publication Peer Review then check out how we do it here at ScienceOpen. Finally, what kick off blog post for Peer Review Week would be complete without a massive THANK YOU to authors of all these reviews of ScienceOpen articles.

 

 

 

In:  Announcements  

Twas the eve of COASP – a special message for OA publishers

KNAW
Image credit: KNAW, Flickr, CC-BY

It seems like just yesterday that we were preparing for our first COASP meeting in Paris. Now Stephanie is traveling to Amsterdam for the 2015 event which begins tomorrow.

A great deal has happened at ScienceOpen since then, here’s a quick rundown:

What do we hope to achieve at this year’s COASP meeting? Stephanie (our CEO) would like to chat with as many of our fellow publishers as possible about how you, like Thieme, can use our platform to raise the visibility of the OA research that you publish even further, which is of benefit to your authors and their careers.

CEO of ScienceOpen, Stephanie Dawson
CEO of ScienceOpen, Stephanie Dawson

As some, but not all, of you know, ScienceOpen has developed a Collections Tool which allows Community Editors to curate articles from any OA publisher in any way they choose.

Here’s one on Cancer Immunotherapy by the President and Editor-in-Chief of Annual Reviews, Richard Gallagher, who is well known to many of you from his roles at Nature and Science. Editors can pick which articles to include by citation history; altmetrics info; year; openness (we feature open articles and closed stubs); add their own Editorial (which receives a DOI); add comments about why they choose each article and then invite others (with five or more peer-reviewed publications on their ORCID) to participate in Post-Publication Peer Review.

Here’s another example of our Collections Tool in action from Thieme, who have have added 3 OA journals to the platform:

We offer a safe and legal networking option for encouraging conversation around content, that complies with publisher policies. ScienceOpen invites those attending COASP to find Stephanie (@SDawsonBerlin) and get involved!