In:  About SO  

ScienceOpen – making publishing easier. Why register? 

Registering with ScienceOpen, the new OA research + publishing network, is almost as easy as pushing this button. To see for yourself, watch this short video or just sign up now (it takes about the same length of time).

Q. For busy researchers & physicians, time is short, so why bother to spend it registering with ScienceOpen?

A. So you can be part of the conversation to move research forward. 

We’re one of the first to maintain the level of expert discussion on our platform by allocating roles and privileges (such as Peer Review) based on the number of publications listed on your ORCID iD.

Have five or more publications on your ORCID iD? You are an Expert or Scientific Member.

  • Review any of over 1.3 million OA articles on Science Open and get a DOI
  • Lead Group discussions about relevant OA articles, make a Collection and call for more submissions

Have one or more publication? You are a Member.

  • Comment on articles

No previous publishing history? Publish for the first time with us.

  • Authors can invite up to 10 experts to review their article
  • Non anonymous peer-review should result in more balanced and relevant feedback
  • Use workspaces to collaborate on any document, publish elsewhere if you’d prefer

Don’t want to register at all? A pity, but naturally you can still read and re-use over 1.3 million OA articles

  • Convenient to have multiple OA publishers on one platform

For those who are new to us and that’s pretty much everyone, here’s a quick overview of ScienceOpen services:

  • Publishes ALL article types: Research, Reviews, Opinions, Posters etc
  • From ALL disciplines: science, medicine, the humanities and social science
  • Aggregates over 1.3 million OA articles from leading publishers
  • Publication within about a week from submission with DOI
  • Transparent Post-Publication Peer Review with DOI
  • Proofs, easy corrections and versioning
  • Article Metrics to track usage and impact
  • Compliant with all Funder OA mandates (CC BY)

Welcome to the next wave of Open Access Publishing. Join us today.

In:  Societies  

Quick update on AAAS letter

Just posting this quick update because the discussion about the AAAS letter, the response of their CEO, and subsequent coverage in Times Higher Education is moving rapidly this morning. With many different time zones involved, it can be tricky to keep up for the few of us who occasionally like to sleep! Here’s a round-up for those on the West Coast who are just waking up to this or anyone who is interested.

As some of you may know, last week 115 people from the the Research and Open Access (OA) community (including some from ScienceOpen and our Boards) sent this letter to the AAAS to protest the pricing level and structure for the new OA journal Science Advances.

Science Advances has a new Twitter stream which has but one tweet:

A couple of things to point out here, Possibly in an effort not to give the open letter more publicity, the AAAS don’t say in the tweet what they are responding to (no mention of open letter or link) and neither do they say in the response. A quick read of the AAAS CEO response (who is Alan Leshner, also not named!), shows it to be a classic PR piece that copiously links to previous corporate (but it’s a non-profit member led organization) AAAS statements about Science Advances, but nowhere to the letter!

Thankfully, the AAAS CEO response does now have a link to the open letter, published at The Winnower, via a comment from Ernesto Priego, a Lecturer in Library Science at the Dept of Library and Information Science, City University, London.

Paul Jump, science and research reporter for Times Higher Education to whom the AAAS response is addressed, has today written an article entitled “Shock and derision as Kent Anderson named Science publisher” which does mention and link to the letter and clears up the confusion. However, it is also worth noting that although the article headline is true, the open letter itself doesn’t make mention of Kent Anderson and focuses on pricing and licensing. 

The team behind the open letter (Erin McKiernan and Jon Tennant plus others) are strategizing their response and I will update this post as the days (probably minutes!) unfold.


The story unfolds:

New 1: 8/28 – the follow up email to  was published as a comment on the original letter. 

New 2: 8/30 – took AAAS a few days to come up with this “response” to the letter, an achingly funny corporate FAQ which doesn’t mention the original or the follow up letter and fails to address any community concerns. Hmm. verdict = lame.

New 3: 9/1 – over the weekend, community get a bit fed up with not being heard by AAAS (a non-profit member organization that is meant to Advance Science). Some prominent news outlets interview Jon Tennant and Erin McKiernan.  First result, this excellent article by New Statesman.

New 4: 9/3 – Second result, excellent article by The Conversation.

In:  Societies  

Open Letter to the Society for Neuroscience

Dear Society for Neuroscience,

This is an open letter concerning the recent launch of the new open access journal, eNeuro.

We welcome the diversification of journal choices for authors looking for open access venues, as well as the willingness of eNeuro to accept negative results and study replications, its membership in the Neuroscience Peer Review Consortium, the publication of peer review syntheses alongside articles, and the requirement that molecular data be publicly available.

As strong supporters of open access, we welcome the commitment of the Society to making the works it publishes freely and openly available. However, we are concerned with several aspects of the specific approach, and outline herein a number of suggestions that would allow eNeuro to provide the full benefits of open access to the communities the journal aims to serve.  Continue reading “Open Letter to the Society for Neuroscience”  

Welcome to author Nitika Pant Pai – impassioned OA advocate!

Today, we’re pleased to announce a new article entitled Head to head comparisons in performance of CD4 point–of-care assays: A Bayesian meta-analysis (2000-2013) by multiple award-winning researcher Nitika Pant Pai, Assistant Professor at McGill University in the Department of Medicine and a Scientist at the MUHC Research Institute and her co-authors Samantha WilkinsonTiago ChiavegattiBenedicte Nauche and Lawrence Joseph.

To mark the publication of her first ScienceOpen article, Nitika, who is also a member of our Editorial Board, prepared this video which is compelling both for what she says and how she says it – with a great deal of commitment!

Just 35 seconds into the video, a big smile spreads over Nitika’s face as she starts to talk about Open Access (OA) and her fist goes up as she says “more power to Open Access”! From then on, she discusses her real-life experiences of not having access to journals when she was training in India, wanting to spare others the same experience and why OA was therefore “the jewel for me”. Nitika’s enthusiasm for OA is infectious and energizing, she calls it a “pure movement”, says it is a way to “give back to the community” and believes it is going to permeate all sections of society, helping knowledge to spread. Continue reading “Welcome to author Nitika Pant Pai – impassioned OA advocate!”  

In:  Societies  

Open letter to the AAAS

Image credit: justinc, Wikimedia Commons, CC BY-SA
Image credit: justinc, Wikimedia Commons, CC BY-SA

Dear AAAS,

This is an open letter concerning the recent launch of the new open access journal, Science Advances. In addition to the welcome diversification in journal choices for authors looking for open access venues, there are many positive aspects of Science Advances: its broad STEM scope, its interest in cross-disciplinary research, and the offering of fee waivers. While we welcome the commitment of the Association to open access, we are also deeply concerned with the specific approach. Herein, we outline a number of suggestions that are in line with both the current direction that scholarly publishing is taking and the needs expressed by the open access community, which this journal aims to serve. Continue reading “Open letter to the AAAS”  

In:  Licenses  

If it ain’t broke… #NoNewLicenses!

Image credit: Frustration, by Eric (e-magic), CC BY-ND.
Image credit: Frustration, by Eric (e-magic), CC BY-ND.

On August 7th, the International Association of Scientific, Technical and Medical Publishers  (STM) responded to a call from the Global Coalition of Access to Research, Science and Education Organizations (signed by more than 80 entities and counting, including ScienceOpen) to withdraw their new model licenses.

So what exactly is all the fuss about? Our headline pretty much sums it up and comes courtesy of OA advocate Graham Steel who rightly observed that “if it ain’t broke, don’t fix it”.

The Open Access (OA) community happily relies on a license suite from Creative Commons (CC) to provide an interoperable and simple standard for our industry. ScienceOpen uses the most flexible CC “attribution license”, known to its many friends as CC-BY. We like it because it allows maximum scope for the creative re-use of research, including commercially, no permission from us required. The only caveat is “credit where credit is due” which only seems fair and means that the original authors and source must be cited, together with the license type and ideally a link to the work. We believe that research works better and faster without any limitations and that CC-BY facilitates this.

So why does the STM Association, the “voice of academic and professional publishing” (but not ours, we’re not members), think that we need new licenses? One reason they give in their response is that “Creative Commons (CC) licenses are designed to be used across the entire creative sector, and are not specifically designed for academic and scholarly publishing”. Sadly, this demonstrates a lack of understanding of the true power of the licenses which comes precisely because they were developed for use across different creative industries.

This is very important for those who work in scientific communication whose job it is to explain science to a broader audience. Research is frequently complex and mashing it up with CC-BY images (of which there are over 58 million at the photo sharing site Flickr), Wikipedia links (over 4 million CC articles) even music can really bring a story to life. Making this content freely available under a CC license is important because advances in science and medicine should ideally be available to and understood by everyone.

For those who have a role in this field, the reality is that navigating and selecting the best content from the overwhelming volume on the internet and then complying with the current dizzying array of more and less restrictive copyright licenses is already quite tricky enough, thank you kindly! We simply don’t need any more complexity.

In:  Announcements  

If you get it wrong you’ll get it right next time – versioning now live

Image credit: Editing a paper, Nic McPhee, Flickr, CC BY-SA
Image credit: Editing a paper, Nic McPhee, Flickr, CC BY-SA

While I am sitting on the sofa composing this blog post, WordPress is seamlessly taking care of my corrections, proofs and versions at the touch of a button. I take this service completely for granted am grateful for it since I usually run through quite a few drafts before I am satisfied.

The time and accuracy necessary to compose a thoughtful research article, which should be replicable and on which others may choose to build, is far greater than the effort I am expending here.

Correcting the scientific literature is therefore rightly more complex and the changes more meaningful, but surely the services offered to scientists should at least match those that are available through this free blogging software?

Sadly, this is not always the case in scientific publishing, where some authors are expected to publish without a proof and making corrections to the PDF is not an option.

Although we all strive for perfection, we know that mistakes occur and that changes need to be made, before and sometimes after publication. When this happens, having a versioning process that readers can follow is reassuring.

Authors who publish with ScienceOpen can:

  • Submit any article type: research, reviews, opinions, clinical case reports, protocols, posters etc.
  • Submit from any discipline: all sciences, medicine, humanities and social sciences
  • Submit manuscripts posted at preprint servers such as BioRxiv and arXiv
  • Use a private pre-publication workspace to develop their manuscript with co-authors
  • Get a yes/no decision on their submission within about a week after an internal check
  • Have their original manuscript published as a Preview with DOI
  • Receive proofs
  • Get copy-editing and language help when necessary as a courtesy benefit (please note, this is not a translation service!)
  • Make as many proof corrections as they wish
  • Sign off on final proofs
  • Have their Preview article replaced with a Final article in PDF, HTML and XML formats 
  • Experience fully transparent post-publication peer-review
  • Can respond to reviewer feedback by publishing a revised version, with either minor or major changes (Version 1 is the original publication, 2/3 can be minor or major in any combination and are included in the Publication Fee)

Each version has a different DOI that is semantically linked to the DOI of the original version for easy tracking. Versions are clearly visible online, the latest are presented first with prominent links to previous versions. We maintain & display information about which version of an article the reviews and comments refer to, this allows readers to follow a link to an earlier version of the content to see the article history.

ScienceOpen strives to offer services to researchers that are the best they can be, for a price ($800) that is significantly less than most OA journals. We welcome you to register today (takes about a minute) and consider publishing your next OA article with us.

In:  Licenses  

ScienceOpen joins the Coalition against STM Licenses

Image credit: keepcalm-o-matic
Image credit: keepcalm-o-matic

The International Association of Scientific, Technical & Medical Publishers (STM) has revealed some new “model” licenses which are ironically entitled “making OA licensing work”. We’re sorry, did we miss something?  Continue reading “ScienceOpen joins the Coalition against STM Licenses”  

In:  Impact Factor  

Article vs Journal Impact – Perspective from PLOS ONE Editorial Director Damian Pattinson

The Hellas Impact Basin on Mars (edited topographical map), which may be the largest crater in the solar system.  Credit: Stuart Rankin, Flickr, CC-BY-NC
The Hellas Impact Basin on Mars (edited topographical map), which may be the largest crater in the solar system. Credit: Stuart Rankin, Flickr, CC-BY-NC

Earlier this summer, I skyped with Damian Pattinson, the Editorial Director of PLOS ONE, about the Impact Factor , its widespread misuse and how, thankfully, altmetrics now offer a better way forward.

Q. The PLOS ONE Impact Factor has decreased for a few years in a row. Is this to be expected given its ranking as the world’s largest journal and remit to publish all good science regardless of impact?

A. I don’t think the Impact Factor is a very good measure of anything, but clearly it is particularly meaningless for a journal that deliberately eschews evaluation of impact in its publications decisions. Our founding principle was that impact should be evaluated post-publication. In terms of the average number of citations per article, my sense is that this is changing due to the expanding breadth of fields covered by PLOS ONE, not to mention its sheer size (we recently published our 100,000th article). When you grow as quickly as we have, your annual average citation rate will always be suppressed by the fact that you are publishing far more papers at the end of the year than at the beginning.

Q. Articles at PLOS ONE undoubtedly vary in terms of the number of citations they accrue. Some are higher, some lower. Is there an observable pattern to this trend overall that is not reflected by a simple read of the Impact Factor?

A. Differences in the average number of citations are, to a large extent, subject specific and therefore a reflection on the size of a particular research community. Smaller fields simply produce fewer scientific papers so statistically it is less likely that even a highly-cited paper will have as many citations as one published in a larger research field. Such a subject-specific examination may also reveal different patterns if one looks at metrics besides citation. That is something we are very interested in exploring with Article-Level Metrics (ALM).

Q. Has the reduction of PLOS ONE’s Impact Factor influenced its submission volume or is that holding up relatively well?

A. Actually, the effective submission volume is still increasing even though the rate of growth has slowed. Year-on-year doubling in perpetuity is not realistic in any arena. We have seen a drop in the number of publications, however, due to a number of factors. Most notably we have seen an increase in the rejection rate as we continue to ensure that the research published in PLOS ONE is of the highest standard. We put all our papers through rigorous checks at submission, including ethical oversight, data availability, adherence to reporting guidelines, and so more papers are rejected before being sent for review.  We have also found an increase of submissions better suited for other dissemination channels, and have worked with authors to pursue them. But to your point, I do not think that last year’s changing IF directly affected PLOS ONE submission volume.

Q. Stepping back for a moment, it really is extraordinary that this arguably flawed mathematical equation, first mentioned by Dr Eugene Garfield in 1955, is still so influential. Garfield said “The impact factor is a very useful tool for evaluation of journals, but it must be used discreetly”.

It seems that the use of the IF is far from discreet since it is a prime marketing tool for many organizations, although not at PLOS which doesn’t list the IF on any of its websites (kudos). But seriously, do you agree with Garfield’s statement that the IF has any merit in journal evaluation, or that evaluating journals at all in the digital age has any merit?

A. Any journal level metric is going to be problematic as “journals” continue to evolve in a digital environment. But the IF is particularly questionable as a tool to measure the “average” citation rates of a journal because the distribution is hardly ever normal – in most journals a few highly cited papers contribute to most of the IF while a great number of papers are hardly cited at all. The San Francisco Declaration on Research Assessment (DORA) is a great first step in moving away from using journal metrics to measure things they were never intended to measure and I recommend everyone to sign it.

Q. What are the main ways that the IF is misused, in your opinion?

A. The level to which the IF has become entrenched in the scientific community is amazing. Grants, tenure, hiring at nearly every level depend to the IF of the journals in which a researcher publishes his or her results. Nearly everyone realizes that it is not a good way to measure quality or productivity, but use it anyway. Actually it’s more complicated than that – everyone uses it because they think that everyone else cares about it! So academics believe that their institutions use it to decide tenure, even when the institutions have committed not to; institutions think that the funders care about it despite commitments to the contrary.  In some way the community itself needs to reflect on this and make some changes. The IF creates perverse incentives for the entire research community, including publishers. Of course journals try to improve their score, often in ways that is damaging to the research community. Because of how the IF is calculated, it makes sense to publish high impact papers in January so that they collect citations for the full 12 months. Some journals hold back the best papers for months to increase the IF – which is bad for both the researchers as well as the whole of science. Journals also choose to publish papers that may be less useful to researchers simply because they are more highly cited. So they will choose to publish (often unnecessary) review articles, while refusing to publish negative results or case reports, which will be cited less often (despite offering more useful information).

Q. Could you imagine another metric which would better measure the output of journals like PLOS ONE?

A. Of course you are right, for journals that cover a broad range of disciplines or for interdisciplinary journals, the Impact Factor is even less useful because of the subject-specific statistics we spoke of earlier. There have been a number of newcomers such as ScienceOpen, PeerJ and F1000Research with a very broad scope – as these and other new platforms come into the publishing mainstream, we may find new metrics to distinguish strengths and weaknesses. Certainly the Impact Factor is not the best mechanism for journal quality and, even less so, researcher quality.

Q. How do you feel about ScienceOpen Advisory Board Member Peter Suber’s statement in a recent ScienceOpen interview that the IF is “an impact metric used as a quality metric, but it doesn’t measure impact well and doesn’t measure quality at all.”

A. How often a paper is cited in the scholarly literature is an important metric. But citations are a blunt tool at best to measure research quality. We do not know anything about the reason a paper was cited – it could be in fact to refute a point or as an example of incorrect methodology. If we only focus on citations, we are missing a more interesting and powerful story. With ALMs that also measure downloads, social media usage, recommendations, and more, we find huge variations in usage. In fields beyond basic research such as clinical medicine or applied technology fields which have implications for the broader population, a paper may have a big political impact, even though it is not highly cited. ALMs are really starting to show us the different ways different articles are received. At the moment we do not have a good measure of quality, but we believe reproducibility of robust results are key.

At PLOS we have been at the forefront of this issue for many years, and are continuing to innovate to find better ways of measuring and improving reproducibility of the literature. With our current focus on “impact” we are disproportionately rewarding the “biggest story” which may have an inverse relationship to reproducibility and quality.

Q. PLOS has a leadership role within the Altmetrics community. To again quote ScienceOpen Advisory Board Member Peter Suber on the current state of play: “Smart people are competing to give us the most nuanced or sensitive picture of research impact they can. We all benefit from that.”

Did PLOS predict the level to which the field has taken off and the amount of competition within it or is the organization pleasantly surprised?

A. The need was clearly there and only increasing over time. When we began our Article-Level Metrics (ALM) work in 2009, we envisioned a better system for all scholars. This is certainly not something specific to Open Access.

Since then, the particular details of how we might better serve science continue to evolve, especially now that the entire community has begun to actively engage with these issues together. It’s great that there is increasing awareness that the expanding suite of article activity metrics cannot fully come of age until data are made freely available for all scholarly literature and widely adopted. Only then can we better understand what the numbers truly mean in order to appropriately apply them. We anticipate that open availability of data will usher in an entire vibrant sector of technology providers that each add value to the metrics in novel ways. We are seeing very promising developments in this direction already.

Q. What’s next for PLOS ALM in terms of new features and developments?

A. Our current efforts are primarily focused on developing the ALM application to serve the needs not only of single publishers but of the entire research ecosystem. We are thrilled too that the community is increasingly participating in this vision, as the application grows into a bona fide open source community project with collaborators across the publishing sector, including CrossRef. On the home front, the application is essentially an open framework that can capture activity on scholarly objects beyond the article, and we’ll be exploring this further with research datasets. Furthermore, we will be overhauling the full display of ALM on the article page metrics tab with visualizations that tell the story of article activity across time and across ALM sources.  We will also release a set of enhancements to ALM Reports so that it better supports the wide breadth of reporting needs for researchers, funders, and institutions.

ScienceOpen Author Interview Series – Daniel Graziotin

ScienceOpen Author Interview Series – Daniel Graziotin

Today’s interview comes from another recent ScienceOpen author, Daniel Graziotin. In his ScienceOpen article, “Green open access in computer science – an exploratory study on author-based self-archiving awareness, practice, and inhibitors,” he analyses the results of an exploratory questionnaire given to Computer Scientists. It addressed issues around various forms of academic publishing, self-archiving of research, and copyright. In the following interview with ScienceOpen, Graziotin gives a unique perspective, as a young scientist and as a software and web developer coming to scientific publishing from the world of open software development. His ideas are bound to be interesting to emerging scientists in particular, as he represents a new globally engaged generation of scientific researchers making full use of open knowledge to further innovation. Continue reading “ScienceOpen Author Interview Series – Daniel Graziotin”